Cluster: HRGMv2_2320_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2320
- CGC Family ID: CGCFAM_10037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2320_2 | HRGMv2_2320_2_2 | 1476 | 3545 | + | 4.A.1.1.9 |
| pfam | HRGMv2_2320_2 | HRGMv2_2320_2_3 | 3636 | 4280 | + | Asp_Glu_race |
| TC | HRGMv2_2320_2 | HRGMv2_2320_2_4 | 4534 | 5466 | - | 2.A.69.4.5 |
| TF | HRGMv2_2320_2 | HRGMv2_2320_2_5 | 5707 | 6477 | + | GntR |
| CAZyme | HRGMv2_2320_2 | HRGMv2_2320_2_6 | 6509 | 10540 | - | CBM54 | SLH | SLH |
Gene ID: HRGMv2_2320_2_2
Type: TC
Location: 1476 - 3545 (+)
Type: TC
Location: 1476 - 3545 (+)
Gene ID: HRGMv2_2320_2_3
Type: pfam
Location: 3636 - 4280 (+)
Type: pfam
Location: 3636 - 4280 (+)
Gene ID: HRGMv2_2320_2_4
Type: TC
Location: 4534 - 5466 (-)
Type: TC
Location: 4534 - 5466 (-)
Gene ID: HRGMv2_2320_2_5
Type: TF
Location: 5707 - 6477 (+)
Type: TF
Location: 5707 - 6477 (+)
Gene ID: HRGMv2_2320_2_6
Type: CAZyme
Location: 6509 - 10540 (-)
Type: CAZyme
Location: 6509 - 10540 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira sp900548595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.