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Cluster: HRGMv2_2318_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2318_74 HRGMv2_2318_74_6 3771 5135 + GH18
pfam HRGMv2_2318_74 HRGMv2_2318_74_7 5302 7260 - tRNA-synt_1 | tRNA-synt_1 | tRNA-synt_1e | tRNA_bind | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Anticodon_3
STP HRGMv2_2318_74 HRGMv2_2318_74_8 7403 7972 - NUDIX
TC HRGMv2_2318_74 HRGMv2_2318_74_9 8512 9543 + 3.A.1.24.2
TC HRGMv2_2318_74 HRGMv2_2318_74_10 9509 10192 + 3.A.1.24.5
TC HRGMv2_2318_74 HRGMv2_2318_74_11 10238 11062 + 3.A.1.24.1
peptidase HRGMv2_2318_74 HRGMv2_2318_74_12 11161 12327 + M20.019
TC HRGMv2_2318_74 HRGMv2_2318_74_13 12398 13741 - 2.A.3.2.5
Gene ID: HRGMv2_2318_74_6
Type: CAZyme
Location: 3771 - 5135 (+)
Gene ID: HRGMv2_2318_74_7
Type: pfam
Location: 5302 - 7260 (-)
Gene ID: HRGMv2_2318_74_8
Type: STP
Location: 7403 - 7972 (-)
Gene ID: HRGMv2_2318_74_9
Type: TC
Location: 8512 - 9543 (+)
Gene ID: HRGMv2_2318_74_10
Type: TC
Location: 9509 - 10192 (+)
Gene ID: HRGMv2_2318_74_11
Type: TC
Location: 10238 - 11062 (+)
Gene ID: HRGMv2_2318_74_12
Type: peptidase
Location: 11161 - 12327 (+)
Gene ID: HRGMv2_2318_74_13
Type: TC
Location: 12398 - 13741 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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