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Cluster: HRGMv2_2318_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2318_72 HRGMv2_2318_72_9 8341 9096 - CE1
TF HRGMv2_2318_72 HRGMv2_2318_72_10 9187 9861 - GerE
STP HRGMv2_2318_72 HRGMv2_2318_72_11 9876 11375 - HATPase_c
TC HRGMv2_2318_72 HRGMv2_2318_72_12 11482 12510 - 3.A.1.17.4
TC HRGMv2_2318_72 HRGMv2_2318_72_13 12532 12990 - 3.A.1.16.2
TC HRGMv2_2318_72 HRGMv2_2318_72_14 13065 13247 - 3.A.1.16.2
TC HRGMv2_2318_72 HRGMv2_2318_72_15 13298 14056 - 3.A.1.17.1
CAZyme HRGMv2_2318_72 HRGMv2_2318_72_16 14248 15384 - GH33
Gene ID: HRGMv2_2318_72_9
Type: CAZyme
Location: 8341 - 9096 (-)
Gene ID: HRGMv2_2318_72_10
Type: TF
Location: 9187 - 9861 (-)
Gene ID: HRGMv2_2318_72_11
Type: STP
Location: 9876 - 11375 (-)
Gene ID: HRGMv2_2318_72_12
Type: TC
Location: 11482 - 12510 (-)
Gene ID: HRGMv2_2318_72_13
Type: TC
Location: 12532 - 12990 (-)
Gene ID: HRGMv2_2318_72_14
Type: TC
Location: 13065 - 13247 (-)
Gene ID: HRGMv2_2318_72_15
Type: TC
Location: 13298 - 14056 (-)
Gene ID: HRGMv2_2318_72_16
Type: CAZyme
Location: 14248 - 15384 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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