dbCAN Logo

Cluster: HRGMv2_2318_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2318_46 HRGMv2_2318_46_1 157 1998 - GH20
pfam HRGMv2_2318_46 HRGMv2_2318_46_2 2199 4565 + F5_F8_type_C | Fn3_assoc | CHB_HEX_C_1
STP HRGMv2_2318_46 HRGMv2_2318_46_3 4672 5223 + TetR_N
TC HRGMv2_2318_46 HRGMv2_2318_46_4 5325 6698 + 2.A.66.1.37
CAZyme HRGMv2_2318_46 HRGMv2_2318_46_5 6789 8528 - GH110
CAZyme HRGMv2_2318_46 HRGMv2_2318_46_6 8698 9996 - GH25
TF HRGMv2_2318_46 HRGMv2_2318_46_7 10220 11221 + LacI
CAZyme HRGMv2_2318_46 HRGMv2_2318_46_8 11277 12362 + GH179
Gene ID: HRGMv2_2318_46_1
Type: CAZyme
Location: 157 - 1998 (-)
Gene ID: HRGMv2_2318_46_2
Type: pfam
Location: 2199 - 4565 (+)
Gene ID: HRGMv2_2318_46_3
Type: STP
Location: 4672 - 5223 (+)
Gene ID: HRGMv2_2318_46_4
Type: TC
Location: 5325 - 6698 (+)
Gene ID: HRGMv2_2318_46_5
Type: CAZyme
Location: 6789 - 8528 (-)
Gene ID: HRGMv2_2318_46_6
Type: CAZyme
Location: 8698 - 9996 (-)
Gene ID: HRGMv2_2318_46_7
Type: TF
Location: 10220 - 11221 (+)
Gene ID: HRGMv2_2318_46_8
Type: CAZyme
Location: 11277 - 12362 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List