Cluster: HRGMv2_2318_CGC40
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2318
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2318_35 | HRGMv2_2318_35_1 | 2 | 781 | + | GT35 |
| pfam | HRGMv2_2318_35 | HRGMv2_2318_35_2 | 1171 | 3171 | - | NTP_transferase | APH |
| NULL(UNKNOWN) | HRGMv2_2318_35 | HRGMv2_2318_35_3 | 3323 | 3919 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2318_35 | HRGMv2_2318_35_4 | 4023 | 5378 | - | GH29 |
| TF | HRGMv2_2318_35 | HRGMv2_2318_35_5 | 5526 | 7604 | - | HTH_AraC |
| TC | HRGMv2_2318_35 | HRGMv2_2318_35_6 | 7821 | 9440 | + | 3.A.1.1.10 |
| TC | HRGMv2_2318_35 | HRGMv2_2318_35_7 | 9515 | 10417 | + | 3.A.1.1.10 |
| TC | HRGMv2_2318_35 | HRGMv2_2318_35_8 | 10433 | 11335 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_2318_35 | HRGMv2_2318_35_9 | 11447 | 13336 | - | GH20 |
| NULL(UNKNOWN) | HRGMv2_2318_35 | HRGMv2_2318_35_10 | 13487 | 13684 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2318_35 | HRGMv2_2318_35_11 | 13700 | 15352 | + | 9.A.11.1.2 |
| TC | HRGMv2_2318_35 | HRGMv2_2318_35_12 | 15355 | 16458 | + | 2.A.3.9.1 |
| pfam | HRGMv2_2318_35 | HRGMv2_2318_35_13 | 16451 | 17635 | + | Spore_GerAC |
| CAZyme | HRGMv2_2318_35 | HRGMv2_2318_35_14 | 18042 | 19040 | + | GT2 |
Gene ID: HRGMv2_2318_35_1
Type: CAZyme
Location: 2 - 781 (+)
Type: CAZyme
Location: 2 - 781 (+)
Gene ID: HRGMv2_2318_35_2
Type: pfam
Location: 1171 - 3171 (-)
Type: pfam
Location: 1171 - 3171 (-)
Gene ID: HRGMv2_2318_35_3
Type:
Location: 3323 - 3919 (-)
Type:
Location: 3323 - 3919 (-)
Gene ID: HRGMv2_2318_35_4
Type: CAZyme
Location: 4023 - 5378 (-)
Type: CAZyme
Location: 4023 - 5378 (-)
Gene ID: HRGMv2_2318_35_5
Type: TF
Location: 5526 - 7604 (-)
Type: TF
Location: 5526 - 7604 (-)
Gene ID: HRGMv2_2318_35_6
Type: TC
Location: 7821 - 9440 (+)
Type: TC
Location: 7821 - 9440 (+)
Gene ID: HRGMv2_2318_35_7
Type: TC
Location: 9515 - 10417 (+)
Type: TC
Location: 9515 - 10417 (+)
Gene ID: HRGMv2_2318_35_8
Type: TC
Location: 10433 - 11335 (+)
Type: TC
Location: 10433 - 11335 (+)
Gene ID: HRGMv2_2318_35_9
Type: CAZyme
Location: 11447 - 13336 (-)
Type: CAZyme
Location: 11447 - 13336 (-)
Gene ID: HRGMv2_2318_35_10
Type:
Location: 13487 - 13684 (+)
Type:
Location: 13487 - 13684 (+)
Gene ID: HRGMv2_2318_35_11
Type: TC
Location: 13700 - 15352 (+)
Type: TC
Location: 13700 - 15352 (+)
Gene ID: HRGMv2_2318_35_12
Type: TC
Location: 15355 - 16458 (+)
Type: TC
Location: 15355 - 16458 (+)
Gene ID: HRGMv2_2318_35_13
Type: pfam
Location: 16451 - 17635 (+)
Type: pfam
Location: 16451 - 17635 (+)
Gene ID: HRGMv2_2318_35_14
Type: CAZyme
Location: 18042 - 19040 (+)
Type: CAZyme
Location: 18042 - 19040 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Zhenhengia
Species
Zhenhengia yiwuensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.