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Cluster: HRGMv2_2318_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2318_22 HRGMv2_2318_22_21 21539 22237 - 3.A.1.132.6
TF HRGMv2_2318_22 HRGMv2_2318_22_22 22237 22605 - GntR
peptidase HRGMv2_2318_22 HRGMv2_2318_22_23 22757 23611 + C82.UNA
CAZyme HRGMv2_2318_22 HRGMv2_2318_22_24 23941 26193 - GH95
NULL(UNKNOWN) HRGMv2_2318_22 HRGMv2_2318_22_25 27047 29068 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2318_22 HRGMv2_2318_22_26 29638 30051 - LMWPc
TC HRGMv2_2318_22 HRGMv2_2318_22_27 30056 31042 - 2.A.59.1.6
pfam HRGMv2_2318_22 HRGMv2_2318_22_28 31119 31352 - Thioredoxin_3
TC HRGMv2_2318_22 HRGMv2_2318_22_29 31374 32378 - 2.A.119.1.3
Gene ID: HRGMv2_2318_22_21
Type: TC
Location: 21539 - 22237 (-)
Gene ID: HRGMv2_2318_22_22
Type: TF
Location: 22237 - 22605 (-)
Gene ID: HRGMv2_2318_22_23
Type: peptidase
Location: 22757 - 23611 (+)
Gene ID: HRGMv2_2318_22_24
Type: CAZyme
Location: 23941 - 26193 (-)
Gene ID: HRGMv2_2318_22_25
Type:
Location: 27047 - 29068 (-)
Gene ID: HRGMv2_2318_22_26
Type: pfam
Location: 29638 - 30051 (-)
Gene ID: HRGMv2_2318_22_27
Type: TC
Location: 30056 - 31042 (-)
Gene ID: HRGMv2_2318_22_28
Type: pfam
Location: 31119 - 31352 (-)
Gene ID: HRGMv2_2318_22_29
Type: TC
Location: 31374 - 32378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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