Cluster: HRGMv2_2318_CGC25
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2318
- CGC Family ID: CGCFAM_00456
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2318_20 | HRGMv2_2318_20_20 | 21537 | 22643 | - | GT4 |
| CAZyme | HRGMv2_2318_20 | HRGMv2_2318_20_21 | 22645 | 23790 | - | GT4 |
| pfam | HRGMv2_2318_20 | HRGMv2_2318_20_22 | 23819 | 24685 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_2318_20 | HRGMv2_2318_20_23 | 24689 | 25333 | - | 9.B.18.1.3 |
| pfam | HRGMv2_2318_20 | HRGMv2_2318_20_24 | 25335 | 25880 | - | PglD_N |
| TC | HRGMv2_2318_20 | HRGMv2_2318_20_25 | 26060 | 26821 | - | 8.A.3.2.1 |
| TC | HRGMv2_2318_20 | HRGMv2_2318_20_26 | 26834 | 27532 | - | 8.A.3.2.3 |
| NULL(UNKNOWN) | HRGMv2_2318_20 | HRGMv2_2318_20_27 | 27617 | 28246 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2318_20 | HRGMv2_2318_20_28 | 28256 | 29767 | - | CBM54 |
| CAZyme | HRGMv2_2318_20 | HRGMv2_2318_20_29 | 29941 | 31884 | - | CBM54 | SLH |
| pfam | HRGMv2_2318_20 | HRGMv2_2318_20_30 | 32077 | 33084 | - | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| TC | HRGMv2_2318_20 | HRGMv2_2318_20_31 | 33276 | 33836 | - | 3.A.1.29.1 |
| CAZyme | HRGMv2_2318_20 | HRGMv2_2318_20_32 | 33957 | 35702 | - | CE4 |
| CAZyme | HRGMv2_2318_20 | HRGMv2_2318_20_33 | 35735 | 36691 | - | GT2 |
Gene ID: HRGMv2_2318_20_20
Type: CAZyme
Location: 21537 - 22643 (-)
Type: CAZyme
Location: 21537 - 22643 (-)
Gene ID: HRGMv2_2318_20_21
Type: CAZyme
Location: 22645 - 23790 (-)
Type: CAZyme
Location: 22645 - 23790 (-)
Gene ID: HRGMv2_2318_20_22
Type: pfam
Location: 23819 - 24685 (-)
Type: pfam
Location: 23819 - 24685 (-)
Gene ID: HRGMv2_2318_20_23
Type: TC
Location: 24689 - 25333 (-)
Type: TC
Location: 24689 - 25333 (-)
Gene ID: HRGMv2_2318_20_24
Type: pfam
Location: 25335 - 25880 (-)
Type: pfam
Location: 25335 - 25880 (-)
Gene ID: HRGMv2_2318_20_25
Type: TC
Location: 26060 - 26821 (-)
Type: TC
Location: 26060 - 26821 (-)
Gene ID: HRGMv2_2318_20_26
Type: TC
Location: 26834 - 27532 (-)
Type: TC
Location: 26834 - 27532 (-)
Gene ID: HRGMv2_2318_20_27
Type:
Location: 27617 - 28246 (-)
Type:
Location: 27617 - 28246 (-)
Gene ID: HRGMv2_2318_20_28
Type: CAZyme
Location: 28256 - 29767 (-)
Type: CAZyme
Location: 28256 - 29767 (-)
Gene ID: HRGMv2_2318_20_29
Type: CAZyme
Location: 29941 - 31884 (-)
Type: CAZyme
Location: 29941 - 31884 (-)
Gene ID: HRGMv2_2318_20_30
Type: pfam
Location: 32077 - 33084 (-)
Type: pfam
Location: 32077 - 33084 (-)
Gene ID: HRGMv2_2318_20_31
Type: TC
Location: 33276 - 33836 (-)
Type: TC
Location: 33276 - 33836 (-)
Gene ID: HRGMv2_2318_20_32
Type: CAZyme
Location: 33957 - 35702 (-)
Type: CAZyme
Location: 33957 - 35702 (-)
Gene ID: HRGMv2_2318_20_33
Type: CAZyme
Location: 35735 - 36691 (-)
Type: CAZyme
Location: 35735 - 36691 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Zhenhengia
Species
Zhenhengia yiwuensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.