Cluster: HRGMv2_2318_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2318
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2318_18 | HRGMv2_2318_18_38 | 39301 | 39825 | + | 2.A.85.4.3 |
| STP | HRGMv2_2318_18 | HRGMv2_2318_18_39 | 39880 | 40662 | - | PglZ |
| NULL(UNKNOWN) | HRGMv2_2318_18 | HRGMv2_2318_18_40 | 40843 | 41145 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2318_18 | HRGMv2_2318_18_41 | 41225 | 43084 | - | GH20 |
| TF | HRGMv2_2318_18 | HRGMv2_2318_18_42 | 43209 | 44024 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2318_18 | HRGMv2_2318_18_43 | 44058 | 45377 | - | 2.A.66.1.7 |
Gene ID: HRGMv2_2318_18_38
Type: TC
Location: 39301 - 39825 (+)
Type: TC
Location: 39301 - 39825 (+)
Gene ID: HRGMv2_2318_18_39
Type: STP
Location: 39880 - 40662 (-)
Type: STP
Location: 39880 - 40662 (-)
Gene ID: HRGMv2_2318_18_40
Type:
Location: 40843 - 41145 (+)
Type:
Location: 40843 - 41145 (+)
Gene ID: HRGMv2_2318_18_41
Type: CAZyme
Location: 41225 - 43084 (-)
Type: CAZyme
Location: 41225 - 43084 (-)
Gene ID: HRGMv2_2318_18_42
Type: TF
Location: 43209 - 44024 (+)
Type: TF
Location: 43209 - 44024 (+)
Gene ID: HRGMv2_2318_18_43
Type: TC
Location: 44058 - 45377 (-)
Type: TC
Location: 44058 - 45377 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Zhenhengia
Species
Zhenhengia yiwuensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.