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Cluster: HRGMv2_2318_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2318_18 HRGMv2_2318_18_27 26278 27360 + GT28
CAZyme HRGMv2_2318_18 HRGMv2_2318_18_28 27354 28040 + CE4
TC HRGMv2_2318_18 HRGMv2_2318_18_29 28030 29070 + 4.D.2.1.5
TF HRGMv2_2318_18 HRGMv2_2318_18_30 29167 29871 + Trans_reg_C
STP HRGMv2_2318_18 HRGMv2_2318_18_31 29858 31441 + HATPase_c | HisKA
TC HRGMv2_2318_18 HRGMv2_2318_18_32 31518 32243 + 3.A.1.122.14
NULL(UNKNOWN) HRGMv2_2318_18 HRGMv2_2318_18_33 32227 34572 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2318_18 HRGMv2_2318_18_34 34562 35914 + 3.A.1.122.1
Gene ID: HRGMv2_2318_18_27
Type: CAZyme
Location: 26278 - 27360 (+)
Gene ID: HRGMv2_2318_18_28
Type: CAZyme
Location: 27354 - 28040 (+)
Gene ID: HRGMv2_2318_18_29
Type: TC
Location: 28030 - 29070 (+)
Gene ID: HRGMv2_2318_18_30
Type: TF
Location: 29167 - 29871 (+)
Gene ID: HRGMv2_2318_18_31
Type: STP
Location: 29858 - 31441 (+)
Gene ID: HRGMv2_2318_18_32
Type: TC
Location: 31518 - 32243 (+)
Gene ID: HRGMv2_2318_18_33
Type:
Location: 32227 - 34572 (+)
Gene ID: HRGMv2_2318_18_34
Type: TC
Location: 34562 - 35914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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