Cluster: HRGMv2_2318_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2318
- CGC Family ID: CGCFAM_00222
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2318_17 | HRGMv2_2318_17_1 | 193 | 1764 | + | CBM50 |
| pfam | HRGMv2_2318_17 | HRGMv2_2318_17_2 | 1992 | 2909 | + | GHMP_kinases_N | GHMP_kinases_C |
| TF | HRGMv2_2318_17 | HRGMv2_2318_17_3 | 2878 | 3555 | + | GntR |
| TC | HRGMv2_2318_17 | HRGMv2_2318_17_4 | 3995 | 4942 | + | 3.A.1.1.29 |
| TC | HRGMv2_2318_17 | HRGMv2_2318_17_5 | 4954 | 5886 | + | 3.A.1.1.9 |
Gene ID: HRGMv2_2318_17_1
Type: CAZyme
Location: 193 - 1764 (+)
Type: CAZyme
Location: 193 - 1764 (+)
Gene ID: HRGMv2_2318_17_2
Type: pfam
Location: 1992 - 2909 (+)
Type: pfam
Location: 1992 - 2909 (+)
Gene ID: HRGMv2_2318_17_3
Type: TF
Location: 2878 - 3555 (+)
Type: TF
Location: 2878 - 3555 (+)
Gene ID: HRGMv2_2318_17_4
Type: TC
Location: 3995 - 4942 (+)
Type: TC
Location: 3995 - 4942 (+)
Gene ID: HRGMv2_2318_17_5
Type: TC
Location: 4954 - 5886 (+)
Type: TC
Location: 4954 - 5886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Zhenhengia
Species
Zhenhengia yiwuensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.