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Cluster: HRGMv2_2318_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2318_16 HRGMv2_2318_16_15 21079 22425 - 2.A.26.1.1
CAZyme HRGMv2_2318_16 HRGMv2_2318_16_16 22878 25100 - GH2
TF HRGMv2_2318_16 HRGMv2_2318_16_17 25257 26273 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2318_16 HRGMv2_2318_16_18 26567 31222 - CBM71 | GH2
sulfatase HRGMv2_2318_16 HRGMv2_2318_16_19 31444 32505 + S1_15
TC HRGMv2_2318_16 HRGMv2_2318_16_20 32578 33948 - 2.A.66.1.33
pfam HRGMv2_2318_16 HRGMv2_2318_16_21 34159 34893 + PNP_UDP_1
TC HRGMv2_2318_16 HRGMv2_2318_16_22 34940 35899 - 3.A.1.2.17
TC HRGMv2_2318_16 HRGMv2_2318_16_23 35899 37050 - 3.A.1.2.17
TC HRGMv2_2318_16 HRGMv2_2318_16_24 37051 38580 - 3.A.1.2.12
Gene ID: HRGMv2_2318_16_15
Type: TC
Location: 21079 - 22425 (-)
Gene ID: HRGMv2_2318_16_16
Type: CAZyme
Location: 22878 - 25100 (-)
Gene ID: HRGMv2_2318_16_17
Type: TF
Location: 25257 - 26273 (-)
Gene ID: HRGMv2_2318_16_18
Type: CAZyme
Location: 26567 - 31222 (-)
Gene ID: HRGMv2_2318_16_19
Type: sulfatase
Location: 31444 - 32505 (+)
Gene ID: HRGMv2_2318_16_20
Type: TC
Location: 32578 - 33948 (-)
Gene ID: HRGMv2_2318_16_21
Type: pfam
Location: 34159 - 34893 (+)
Gene ID: HRGMv2_2318_16_22
Type: TC
Location: 34940 - 35899 (-)
Gene ID: HRGMv2_2318_16_23
Type: TC
Location: 35899 - 37050 (-)
Gene ID: HRGMv2_2318_16_24
Type: TC
Location: 37051 - 38580 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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