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Cluster: HRGMv2_2318_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2318_15 HRGMv2_2318_15_1 183 1892 - GH154
CAZyme HRGMv2_2318_15 HRGMv2_2318_15_2 1955 3079 - GH88
NULL(UNKNOWN) HRGMv2_2318_15 HRGMv2_2318_15_3 3290 5305 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2318_15 HRGMv2_2318_15_4 5335 6708 - GH29
TF HRGMv2_2318_15 HRGMv2_2318_15_5 6855 7676 + HTH_AraC | HTH_AraC
STP HRGMv2_2318_15 HRGMv2_2318_15_6 7741 9342 - SBP_bac_1
TC HRGMv2_2318_15 HRGMv2_2318_15_7 9361 10350 - 3.A.1.1.10
TC HRGMv2_2318_15 HRGMv2_2318_15_8 10344 11255 - 3.A.1.1.10
Gene ID: HRGMv2_2318_15_1
Type: CAZyme
Location: 183 - 1892 (-)
Gene ID: HRGMv2_2318_15_2
Type: CAZyme
Location: 1955 - 3079 (-)
Gene ID: HRGMv2_2318_15_3
Type:
Location: 3290 - 5305 (-)
Gene ID: HRGMv2_2318_15_4
Type: CAZyme
Location: 5335 - 6708 (-)
Gene ID: HRGMv2_2318_15_5
Type: TF
Location: 6855 - 7676 (+)
Gene ID: HRGMv2_2318_15_6
Type: STP
Location: 7741 - 9342 (-)
Gene ID: HRGMv2_2318_15_7
Type: TC
Location: 9361 - 10350 (-)
Gene ID: HRGMv2_2318_15_8
Type: TC
Location: 10344 - 11255 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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