Cluster: HRGMv2_2318_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2318
- CGC Family ID: CGCFAM_10033
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2318_13 | HRGMv2_2318_13_13 | 14000 | 17128 | - | GH38 |
| CAZyme | HRGMv2_2318_13 | HRGMv2_2318_13_14 | 17157 | 18146 | - | GH130_2 |
| TF | HRGMv2_2318_13 | HRGMv2_2318_13_15 | 18187 | 19203 | - | LacI |
| pfam | HRGMv2_2318_13 | HRGMv2_2318_13_16 | 19297 | 21846 | - | Transglut_core | Transglut_core |
| CAZyme | HRGMv2_2318_13 | HRGMv2_2318_13_17 | 21859 | 22890 | - | CBM9 |
| CAZyme | HRGMv2_2318_13 | HRGMv2_2318_13_18 | 22916 | 24202 | - | GH29 |
| peptidase | HRGMv2_2318_13 | HRGMv2_2318_13_19 | 24239 | 25660 | - | M17.UPW |
| CAZyme | HRGMv2_2318_13 | HRGMv2_2318_13_20 | 25685 | 26710 | - | GH18 |
| TC | HRGMv2_2318_13 | HRGMv2_2318_13_21 | 26836 | 27684 | - | 2.A.115.1.5 |
| TC | HRGMv2_2318_13 | HRGMv2_2318_13_22 | 27754 | 29322 | - | 3.A.1.1.10 |
| TC | HRGMv2_2318_13 | HRGMv2_2318_13_23 | 29388 | 30302 | - | 3.A.1.1.10 |
| TC | HRGMv2_2318_13 | HRGMv2_2318_13_24 | 30320 | 31276 | - | 3.A.1.1.10 |
| TC | HRGMv2_2318_13 | HRGMv2_2318_13_25 | 31740 | 32834 | - | 2.A.120.1.10 |
Gene ID: HRGMv2_2318_13_13
Type: CAZyme
Location: 14000 - 17128 (-)
Type: CAZyme
Location: 14000 - 17128 (-)
Gene ID: HRGMv2_2318_13_14
Type: CAZyme
Location: 17157 - 18146 (-)
Type: CAZyme
Location: 17157 - 18146 (-)
Gene ID: HRGMv2_2318_13_15
Type: TF
Location: 18187 - 19203 (-)
Type: TF
Location: 18187 - 19203 (-)
Gene ID: HRGMv2_2318_13_16
Type: pfam
Location: 19297 - 21846 (-)
Type: pfam
Location: 19297 - 21846 (-)
Gene ID: HRGMv2_2318_13_17
Type: CAZyme
Location: 21859 - 22890 (-)
Type: CAZyme
Location: 21859 - 22890 (-)
Gene ID: HRGMv2_2318_13_18
Type: CAZyme
Location: 22916 - 24202 (-)
Type: CAZyme
Location: 22916 - 24202 (-)
Gene ID: HRGMv2_2318_13_19
Type: peptidase
Location: 24239 - 25660 (-)
Type: peptidase
Location: 24239 - 25660 (-)
Gene ID: HRGMv2_2318_13_20
Type: CAZyme
Location: 25685 - 26710 (-)
Type: CAZyme
Location: 25685 - 26710 (-)
Gene ID: HRGMv2_2318_13_21
Type: TC
Location: 26836 - 27684 (-)
Type: TC
Location: 26836 - 27684 (-)
Gene ID: HRGMv2_2318_13_22
Type: TC
Location: 27754 - 29322 (-)
Type: TC
Location: 27754 - 29322 (-)
Gene ID: HRGMv2_2318_13_23
Type: TC
Location: 29388 - 30302 (-)
Type: TC
Location: 29388 - 30302 (-)
Gene ID: HRGMv2_2318_13_24
Type: TC
Location: 30320 - 31276 (-)
Type: TC
Location: 30320 - 31276 (-)
Gene ID: HRGMv2_2318_13_25
Type: TC
Location: 31740 - 32834 (-)
Type: TC
Location: 31740 - 32834 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Zhenhengia
Species
Zhenhengia yiwuensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.