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Cluster: HRGMv2_2318_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2318_11 HRGMv2_2318_11_19 18335 19075 + 3.A.1.23.8
pfam HRGMv2_2318_11 HRGMv2_2318_11_20 19075 19365 + CbiN
pfam HRGMv2_2318_11 HRGMv2_2318_11_21 19369 20151 + CbiQ
TC HRGMv2_2318_11 HRGMv2_2318_11_22 20156 21007 + 3.A.1.23.2
pfam HRGMv2_2318_11 HRGMv2_2318_11_23 21159 21791 - DUF305
CAZyme HRGMv2_2318_11 HRGMv2_2318_11_24 21834 23957 - GH31_1
TC HRGMv2_2318_11 HRGMv2_2318_11_25 24728 25300 - 2.A.107.1.2
Gene ID: HRGMv2_2318_11_19
Type: TC
Location: 18335 - 19075 (+)
Gene ID: HRGMv2_2318_11_20
Type: pfam
Location: 19075 - 19365 (+)
Gene ID: HRGMv2_2318_11_21
Type: pfam
Location: 19369 - 20151 (+)
Gene ID: HRGMv2_2318_11_22
Type: TC
Location: 20156 - 21007 (+)
Gene ID: HRGMv2_2318_11_23
Type: pfam
Location: 21159 - 21791 (-)
Gene ID: HRGMv2_2318_11_24
Type: CAZyme
Location: 21834 - 23957 (-)
Gene ID: HRGMv2_2318_11_25
Type: TC
Location: 24728 - 25300 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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