dbCAN Logo

Cluster: HRGMv2_2314_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2314_5 HRGMv2_2314_5_36 38701 39546 - 3.A.1.1.41
TC HRGMv2_2314_5 HRGMv2_2314_5_37 39543 40439 - 3.A.1.1.7
STP HRGMv2_2314_5 HRGMv2_2314_5_38 40473 41876 - SBP_bac_1
TF HRGMv2_2314_5 HRGMv2_2314_5_39 42033 42920 - HTH_AraC
CAZyme HRGMv2_2314_5 HRGMv2_2314_5_40 43096 44031 + CE7
pfam HRGMv2_2314_5 HRGMv2_2314_5_41 44155 44907 - CutC
TC HRGMv2_2314_5 HRGMv2_2314_5_42 44904 45161 - 8.A.8.1.1
TC HRGMv2_2314_5 HRGMv2_2314_5_43 45189 46802 - 8.A.7.1.1
Gene ID: HRGMv2_2314_5_36
Type: TC
Location: 38701 - 39546 (-)
Gene ID: HRGMv2_2314_5_37
Type: TC
Location: 39543 - 40439 (-)
Gene ID: HRGMv2_2314_5_38
Type: STP
Location: 40473 - 41876 (-)
Gene ID: HRGMv2_2314_5_39
Type: TF
Location: 42033 - 42920 (-)
Gene ID: HRGMv2_2314_5_40
Type: CAZyme
Location: 43096 - 44031 (+)
Gene ID: HRGMv2_2314_5_41
Type: pfam
Location: 44155 - 44907 (-)
Gene ID: HRGMv2_2314_5_42
Type: TC
Location: 44904 - 45161 (-)
Gene ID: HRGMv2_2314_5_43
Type: TC
Location: 45189 - 46802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List