Cluster: HRGMv2_2314_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2314
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2314_5 | HRGMv2_2314_5_7 | 5778 | 8480 | - | 3.A.12.1.1 |
| pfam | HRGMv2_2314_5 | HRGMv2_2314_5_8 | 8501 | 9379 | - | BacA |
| peptidase | HRGMv2_2314_5 | HRGMv2_2314_5_9 | 9477 | 10211 | - | S14.UPW |
| CAZyme | HRGMv2_2314_5 | HRGMv2_2314_5_10 | 10364 | 11818 | - | GT5 |
Gene ID: HRGMv2_2314_5_7
Type: TC
Location: 5778 - 8480 (-)
Type: TC
Location: 5778 - 8480 (-)
Gene ID: HRGMv2_2314_5_8
Type: pfam
Location: 8501 - 9379 (-)
Type: pfam
Location: 8501 - 9379 (-)
Gene ID: HRGMv2_2314_5_9
Type: peptidase
Location: 9477 - 10211 (-)
Type: peptidase
Location: 9477 - 10211 (-)
Gene ID: HRGMv2_2314_5_10
Type: CAZyme
Location: 10364 - 11818 (-)
Type: CAZyme
Location: 10364 - 11818 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2314_5_10 | vegetarian > vegan | 1.19547 | 0.01135 |