dbCAN Logo

Cluster: HRGMv2_2314_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2314_4 HRGMv2_2314_4_35 32219 33331 - 3.A.1.1.26
NULL(UNKNOWN) HRGMv2_2314_4 HRGMv2_2314_4_36 33552 34268 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2314_4 HRGMv2_2314_4_37 34405 37479 - GH2
STP HRGMv2_2314_4 HRGMv2_2314_4_38 37617 39185 - SBP_bac_1
TC HRGMv2_2314_4 HRGMv2_2314_4_39 39269 40195 - 3.A.1.1.29
TC HRGMv2_2314_4 HRGMv2_2314_4_40 40212 41165 - 3.A.1.1.29
TF HRGMv2_2314_4 HRGMv2_2314_4_41 41399 42481 + HTH_AraC
TC HRGMv2_2314_4 HRGMv2_2314_4_42 42478 44259 + 8.A.59.2.1
CAZyme HRGMv2_2314_4 HRGMv2_2314_4_43 44384 45736 + GH29
CAZyme HRGMv2_2314_4 HRGMv2_2314_4_44 45887 48685 - CBM32 | GH136
Gene ID: HRGMv2_2314_4_35
Type: TC
Location: 32219 - 33331 (-)
Gene ID: HRGMv2_2314_4_36
Type:
Location: 33552 - 34268 (-)
Gene ID: HRGMv2_2314_4_37
Type: CAZyme
Location: 34405 - 37479 (-)
Gene ID: HRGMv2_2314_4_38
Type: STP
Location: 37617 - 39185 (-)
Gene ID: HRGMv2_2314_4_39
Type: TC
Location: 39269 - 40195 (-)
Gene ID: HRGMv2_2314_4_40
Type: TC
Location: 40212 - 41165 (-)
Gene ID: HRGMv2_2314_4_41
Type: TF
Location: 41399 - 42481 (+)
Gene ID: HRGMv2_2314_4_42
Type: TC
Location: 42478 - 44259 (+)
Gene ID: HRGMv2_2314_4_43
Type: CAZyme
Location: 44384 - 45736 (+)
Gene ID: HRGMv2_2314_4_44
Type: CAZyme
Location: 45887 - 48685 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List