dbCAN Logo

Cluster: HRGMv2_2314_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2314_3 HRGMv2_2314_3_97 98801 100342 - GH77
TF HRGMv2_2314_3 HRGMv2_2314_3_98 100411 101421 - LacI
TC HRGMv2_2314_3 HRGMv2_2314_3_99 101460 102332 - 3.A.1.1.45
TC HRGMv2_2314_3 HRGMv2_2314_3_100 102332 103174 - 3.A.1.1.45
TC HRGMv2_2314_3 HRGMv2_2314_3_101 103256 104662 - 3.A.1.1.45
pfam HRGMv2_2314_3 HRGMv2_2314_3_102 104860 105669 - DUF3169
TF HRGMv2_2314_3 HRGMv2_2314_3_103 105659 105874 - HTH_3
TC HRGMv2_2314_3 HRGMv2_2314_3_104 106061 107362 + 2.A.49.9.2
pfam HRGMv2_2314_3 HRGMv2_2314_3_105 107456 107881 - DUF1284
TC HRGMv2_2314_3 HRGMv2_2314_3_106 107881 108450 - 3.A.1.25.5
TC HRGMv2_2314_3 HRGMv2_2314_3_107 108547 109584 - 2.A.4.7.2
Gene ID: HRGMv2_2314_3_97
Type: CAZyme
Location: 98801 - 100342 (-)
Gene ID: HRGMv2_2314_3_98
Type: TF
Location: 100411 - 101421 (-)
Gene ID: HRGMv2_2314_3_99
Type: TC
Location: 101460 - 102332 (-)
Gene ID: HRGMv2_2314_3_100
Type: TC
Location: 102332 - 103174 (-)
Gene ID: HRGMv2_2314_3_101
Type: TC
Location: 103256 - 104662 (-)
Gene ID: HRGMv2_2314_3_102
Type: pfam
Location: 104860 - 105669 (-)
Gene ID: HRGMv2_2314_3_103
Type: TF
Location: 105659 - 105874 (-)
Gene ID: HRGMv2_2314_3_104
Type: TC
Location: 106061 - 107362 (+)
Gene ID: HRGMv2_2314_3_105
Type: pfam
Location: 107456 - 107881 (-)
Gene ID: HRGMv2_2314_3_106
Type: TC
Location: 107881 - 108450 (-)
Gene ID: HRGMv2_2314_3_107
Type: TC
Location: 108547 - 109584 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2314_3_99 vegetarian > vegan 1.23548 0.01135

🧭 Explore Read Mapping of CGC

← Back to Cluster List