Cluster: HRGMv2_2314_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2314
- CGC Family ID: CGCFAM_00032
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2314_37 | HRGMv2_2314_37_1 | 2 | 1216 | - | 9.B.18.1.3 |
| CAZyme | HRGMv2_2314_37 | HRGMv2_2314_37_2 | 1363 | 2328 | - | GT2 |
| CAZyme | HRGMv2_2314_37 | HRGMv2_2314_37_3 | 2349 | 4385 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2314_37 | HRGMv2_2314_37_4 | 4382 | 4579 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2314_37 | HRGMv2_2314_37_5 | 4602 | 7124 | - | GT2 |
Gene ID: HRGMv2_2314_37_1
Type: TC
Location: 2 - 1216 (-)
Type: TC
Location: 2 - 1216 (-)
Gene ID: HRGMv2_2314_37_2
Type: CAZyme
Location: 1363 - 2328 (-)
Type: CAZyme
Location: 1363 - 2328 (-)
Gene ID: HRGMv2_2314_37_3
Type: CAZyme
Location: 2349 - 4385 (-)
Type: CAZyme
Location: 2349 - 4385 (-)
Gene ID: HRGMv2_2314_37_4
Type:
Location: 4382 - 4579 (-)
Type:
Location: 4382 - 4579 (-)
Gene ID: HRGMv2_2314_37_5
Type: CAZyme
Location: 4602 - 7124 (-)
Type: CAZyme
Location: 4602 - 7124 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.