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Cluster: HRGMv2_2314_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2314_28 HRGMv2_2314_28_10 7310 8173 + 3.A.1.26.7
TC HRGMv2_2314_28 HRGMv2_2314_28_11 8251 9135 + 3.A.1.25.6
TC HRGMv2_2314_28 HRGMv2_2314_28_12 9138 9947 + 3.A.1.25.4
pfam HRGMv2_2314_28 HRGMv2_2314_28_13 10150 10911 + PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_2314_28 HRGMv2_2314_28_14 10994 12694 + 1.B.52.2.2
pfam HRGMv2_2314_28 HRGMv2_2314_28_15 12892 13320 + Ribosomal_L13
pfam HRGMv2_2314_28 HRGMv2_2314_28_16 13338 13730 + Ribosomal_S9
CAZyme HRGMv2_2314_28 HRGMv2_2314_28_17 14037 14825 + GH25
Gene ID: HRGMv2_2314_28_10
Type: TC
Location: 7310 - 8173 (+)
Gene ID: HRGMv2_2314_28_11
Type: TC
Location: 8251 - 9135 (+)
Gene ID: HRGMv2_2314_28_12
Type: TC
Location: 9138 - 9947 (+)
Gene ID: HRGMv2_2314_28_13
Type: pfam
Location: 10150 - 10911 (+)
Gene ID: HRGMv2_2314_28_14
Type: TC
Location: 10994 - 12694 (+)
Gene ID: HRGMv2_2314_28_15
Type: pfam
Location: 12892 - 13320 (+)
Gene ID: HRGMv2_2314_28_16
Type: pfam
Location: 13338 - 13730 (+)
Gene ID: HRGMv2_2314_28_17
Type: CAZyme
Location: 14037 - 14825 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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