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Cluster: HRGMv2_2314_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2314_22 HRGMv2_2314_22_11 13277 15031 + 3.A.1.106.8
TC HRGMv2_2314_22 HRGMv2_2314_22_12 15028 17058 + 3.A.1.106.8
TC HRGMv2_2314_22 HRGMv2_2314_22_13 17066 17803 - 3.A.1.3.9
TC HRGMv2_2314_22 HRGMv2_2314_22_14 17793 18578 - 3.A.1.3.17
TC HRGMv2_2314_22 HRGMv2_2314_22_15 18575 19468 - 3.A.1.3.23
CAZyme HRGMv2_2314_22 HRGMv2_2314_22_16 19646 22135 - CBM54
NULL(UNKNOWN) HRGMv2_2314_22 HRGMv2_2314_22_17 22433 22621 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2314_22 HRGMv2_2314_22_18 22625 23443 + GDPD
TC HRGMv2_2314_22 HRGMv2_2314_22_19 23512 25068 - 3.A.1.121.4
Gene ID: HRGMv2_2314_22_11
Type: TC
Location: 13277 - 15031 (+)
Gene ID: HRGMv2_2314_22_12
Type: TC
Location: 15028 - 17058 (+)
Gene ID: HRGMv2_2314_22_13
Type: TC
Location: 17066 - 17803 (-)
Gene ID: HRGMv2_2314_22_14
Type: TC
Location: 17793 - 18578 (-)
Gene ID: HRGMv2_2314_22_15
Type: TC
Location: 18575 - 19468 (-)
Gene ID: HRGMv2_2314_22_16
Type: CAZyme
Location: 19646 - 22135 (-)
Gene ID: HRGMv2_2314_22_17
Type:
Location: 22433 - 22621 (+)
Gene ID: HRGMv2_2314_22_18
Type: pfam
Location: 22625 - 23443 (+)
Gene ID: HRGMv2_2314_22_19
Type: TC
Location: 23512 - 25068 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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