Cluster: HRGMv2_2314_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2314
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2314_19 | HRGMv2_2314_19_26 | 24399 | 25187 | + | 2.A.102.4.4 |
| CAZyme | HRGMv2_2314_19 | HRGMv2_2314_19_27 | 25336 | 27153 | - | GH20 |
| pfam | HRGMv2_2314_19 | HRGMv2_2314_19_28 | 27196 | 29142 | - | DUF4838 |
| TC | HRGMv2_2314_19 | HRGMv2_2314_19_29 | 29454 | 30404 | + | 3.A.1.1.10 |
| TC | HRGMv2_2314_19 | HRGMv2_2314_19_30 | 30440 | 31348 | + | 3.A.1.1.9 |
Gene ID: HRGMv2_2314_19_26
Type: TC
Location: 24399 - 25187 (+)
Type: TC
Location: 24399 - 25187 (+)
Gene ID: HRGMv2_2314_19_27
Type: CAZyme
Location: 25336 - 27153 (-)
Type: CAZyme
Location: 25336 - 27153 (-)
Gene ID: HRGMv2_2314_19_28
Type: pfam
Location: 27196 - 29142 (-)
Type: pfam
Location: 27196 - 29142 (-)
Gene ID: HRGMv2_2314_19_29
Type: TC
Location: 29454 - 30404 (+)
Type: TC
Location: 29454 - 30404 (+)
Gene ID: HRGMv2_2314_19_30
Type: TC
Location: 30440 - 31348 (+)
Type: TC
Location: 30440 - 31348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.