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Cluster: HRGMv2_2314_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2314_19 HRGMv2_2314_19_9 8667 9365 + 3.A.1.1.42
NULL(UNKNOWN) HRGMv2_2314_19 HRGMv2_2314_19_10 9365 9502 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2314_19 HRGMv2_2314_19_11 9451 10197 + 3.A.1.1.24
STP HRGMv2_2314_19 HRGMv2_2314_19_12 10226 10888 + SBP_bac_1
STP HRGMv2_2314_19 HRGMv2_2314_19_13 10961 11728 + SBP_bac_1
TC HRGMv2_2314_19 HRGMv2_2314_19_14 12005 12784 + 3.A.1.17.1
TC HRGMv2_2314_19 HRGMv2_2314_19_15 12760 13551 + 3.A.1.16.3
STP HRGMv2_2314_19 HRGMv2_2314_19_16 13644 14720 + SBP_bac_3
NULL(UNKNOWN) HRGMv2_2314_19 HRGMv2_2314_19_17 14796 15626 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2314_19 HRGMv2_2314_19_18 15770 16921 + CE9
Gene ID: HRGMv2_2314_19_9
Type: TC
Location: 8667 - 9365 (+)
Gene ID: HRGMv2_2314_19_10
Type:
Location: 9365 - 9502 (+)
Gene ID: HRGMv2_2314_19_11
Type: TC
Location: 9451 - 10197 (+)
Gene ID: HRGMv2_2314_19_12
Type: STP
Location: 10226 - 10888 (+)
Gene ID: HRGMv2_2314_19_13
Type: STP
Location: 10961 - 11728 (+)
Gene ID: HRGMv2_2314_19_14
Type: TC
Location: 12005 - 12784 (+)
Gene ID: HRGMv2_2314_19_15
Type: TC
Location: 12760 - 13551 (+)
Gene ID: HRGMv2_2314_19_16
Type: STP
Location: 13644 - 14720 (+)
Gene ID: HRGMv2_2314_19_17
Type:
Location: 14796 - 15626 (+)
Gene ID: HRGMv2_2314_19_18
Type: CAZyme
Location: 15770 - 16921 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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