Cluster: HRGMv2_2314_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2314
- CGC Family ID: CGCFAM_00457
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2314_16 | HRGMv2_2314_16_54 | 54673 | 56937 | + | GH73 |
| pfam | HRGMv2_2314_16 | HRGMv2_2314_16_55 | 56950 | 59112 | + | Cadherin-like |
| TC | HRGMv2_2314_16 | HRGMv2_2314_16_56 | 59157 | 61613 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_2314_16 | HRGMv2_2314_16_57 | 61734 | 62144 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2314_16 | HRGMv2_2314_16_58 | 62202 | 63893 | + | 1.B.52.2.1 |
Gene ID: HRGMv2_2314_16_54
Type: CAZyme
Location: 54673 - 56937 (+)
Type: CAZyme
Location: 54673 - 56937 (+)
Gene ID: HRGMv2_2314_16_55
Type: pfam
Location: 56950 - 59112 (+)
Type: pfam
Location: 56950 - 59112 (+)
Gene ID: HRGMv2_2314_16_56
Type: TC
Location: 59157 - 61613 (+)
Type: TC
Location: 59157 - 61613 (+)
Gene ID: HRGMv2_2314_16_57
Type:
Location: 61734 - 62144 (+)
Type:
Location: 61734 - 62144 (+)
Gene ID: HRGMv2_2314_16_58
Type: TC
Location: 62202 - 63893 (+)
Type: TC
Location: 62202 - 63893 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.