Cluster: HRGMv2_2314_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2314
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2314_14 | HRGMv2_2314_14_52 | 62077 | 62955 | - | 3.A.1.1.10 |
| TC | HRGMv2_2314_14 | HRGMv2_2314_14_53 | 62969 | 63778 | - | 3.A.1.1.3 |
| TC | HRGMv2_2314_14 | HRGMv2_2314_14_54 | 63940 | 65262 | - | 3.A.1.1.33 |
| CAZyme | HRGMv2_2314_14 | HRGMv2_2314_14_55 | 65536 | 71106 | - | GH123 | GH33 |
Gene ID: HRGMv2_2314_14_52
Type: TC
Location: 62077 - 62955 (-)
Type: TC
Location: 62077 - 62955 (-)
Gene ID: HRGMv2_2314_14_53
Type: TC
Location: 62969 - 63778 (-)
Type: TC
Location: 62969 - 63778 (-)
Gene ID: HRGMv2_2314_14_54
Type: TC
Location: 63940 - 65262 (-)
Type: TC
Location: 63940 - 65262 (-)
Gene ID: HRGMv2_2314_14_55
Type: CAZyme
Location: 65536 - 71106 (-)
Type: CAZyme
Location: 65536 - 71106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.