Cluster: HRGMv2_2314_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2314
- CGC Family ID: CGCFAM_00682
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2314_2 | HRGMv2_2314_2_29 | 30794 | 31687 | + | 3.A.1.1.20 |
| TC | HRGMv2_2314_2 | HRGMv2_2314_2_30 | 31698 | 32579 | + | 3.A.1.1.34 |
| STP | HRGMv2_2314_2 | HRGMv2_2314_2_31 | 32617 | 34005 | + | SBP_bac_1 |
| pfam | HRGMv2_2314_2 | HRGMv2_2314_2_32 | 34036 | 34842 | + | Amidohydro_2 |
| CAZyme | HRGMv2_2314_2 | HRGMv2_2314_2_33 | 34917 | 35891 | + | CE7 |
Gene ID: HRGMv2_2314_2_29
Type: TC
Location: 30794 - 31687 (+)
Type: TC
Location: 30794 - 31687 (+)
Gene ID: HRGMv2_2314_2_30
Type: TC
Location: 31698 - 32579 (+)
Type: TC
Location: 31698 - 32579 (+)
Gene ID: HRGMv2_2314_2_31
Type: STP
Location: 32617 - 34005 (+)
Type: STP
Location: 32617 - 34005 (+)
Gene ID: HRGMv2_2314_2_32
Type: pfam
Location: 34036 - 34842 (+)
Type: pfam
Location: 34036 - 34842 (+)
Gene ID: HRGMv2_2314_2_33
Type: CAZyme
Location: 34917 - 35891 (+)
Type: CAZyme
Location: 34917 - 35891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.