Cluster: HRGMv2_2314_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2314
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2314_14 | HRGMv2_2314_14_40 | 43525 | 46140 | + | GH136 |
| NULL(UNKNOWN) | HRGMv2_2314_14 | HRGMv2_2314_14_41 | 46418 | 47236 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2314_14 | HRGMv2_2314_14_42 | 47470 | 50070 | - | GH95 |
| pfam | HRGMv2_2314_14 | HRGMv2_2314_14_43 | 50320 | 51897 | - | ABC_export |
| TC | HRGMv2_2314_14 | HRGMv2_2314_14_44 | 51910 | 52614 | - | 3.A.1.128.3 |
Gene ID: HRGMv2_2314_14_40
Type: CAZyme
Location: 43525 - 46140 (+)
Type: CAZyme
Location: 43525 - 46140 (+)
Gene ID: HRGMv2_2314_14_41
Type:
Location: 46418 - 47236 (+)
Type:
Location: 46418 - 47236 (+)
Gene ID: HRGMv2_2314_14_42
Type: CAZyme
Location: 47470 - 50070 (-)
Type: CAZyme
Location: 47470 - 50070 (-)
Gene ID: HRGMv2_2314_14_43
Type: pfam
Location: 50320 - 51897 (-)
Type: pfam
Location: 50320 - 51897 (-)
Gene ID: HRGMv2_2314_14_44
Type: TC
Location: 51910 - 52614 (-)
Type: TC
Location: 51910 - 52614 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.