Cluster: HRGMv2_2314_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2314
- CGC Family ID: CGCFAM_01058
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2314_13 | HRGMv2_2314_13_48 | 51169 | 53433 | - | GH2 |
| pfam | HRGMv2_2314_13 | HRGMv2_2314_13_49 | 53696 | 54448 | + | AIM24 |
| CAZyme | HRGMv2_2314_13 | HRGMv2_2314_13_50 | 54604 | 55887 | - | GH3 |
| TC | HRGMv2_2314_13 | HRGMv2_2314_13_51 | 55984 | 57285 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_2314_13_48
Type: CAZyme
Location: 51169 - 53433 (-)
Type: CAZyme
Location: 51169 - 53433 (-)
Gene ID: HRGMv2_2314_13_49
Type: pfam
Location: 53696 - 54448 (+)
Type: pfam
Location: 53696 - 54448 (+)
Gene ID: HRGMv2_2314_13_50
Type: CAZyme
Location: 54604 - 55887 (-)
Type: CAZyme
Location: 54604 - 55887 (-)
Gene ID: HRGMv2_2314_13_51
Type: TC
Location: 55984 - 57285 (-)
Type: TC
Location: 55984 - 57285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.