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Cluster: HRGMv2_2314_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2314_12 HRGMv2_2314_12_34 36090 37562 + GT5
pfam HRGMv2_2314_12 HRGMv2_2314_12_35 37584 38480 - DUF5688
TC HRGMv2_2314_12 HRGMv2_2314_12_36 38654 39721 - 3.A.1.11.7
TC HRGMv2_2314_12 HRGMv2_2314_12_37 39731 40519 - 3.A.1.11.8
TC HRGMv2_2314_12 HRGMv2_2314_12_38 40513 41337 - 3.A.1.11.1
TC HRGMv2_2314_12 HRGMv2_2314_12_39 41330 42403 - 3.A.1.11.8
TC HRGMv2_2314_12 HRGMv2_2314_12_40 42771 43922 + 3.A.1.2.17
TC HRGMv2_2314_12 HRGMv2_2314_12_41 43922 45598 + 3.A.1.2.17
TC HRGMv2_2314_12 HRGMv2_2314_12_42 45600 46712 + 3.A.1.2.10
TC HRGMv2_2314_12 HRGMv2_2314_12_43 46712 47665 + 3.A.1.2.17
Gene ID: HRGMv2_2314_12_34
Type: CAZyme
Location: 36090 - 37562 (+)
Gene ID: HRGMv2_2314_12_35
Type: pfam
Location: 37584 - 38480 (-)
Gene ID: HRGMv2_2314_12_36
Type: TC
Location: 38654 - 39721 (-)
Gene ID: HRGMv2_2314_12_37
Type: TC
Location: 39731 - 40519 (-)
Gene ID: HRGMv2_2314_12_38
Type: TC
Location: 40513 - 41337 (-)
Gene ID: HRGMv2_2314_12_39
Type: TC
Location: 41330 - 42403 (-)
Gene ID: HRGMv2_2314_12_40
Type: TC
Location: 42771 - 43922 (+)
Gene ID: HRGMv2_2314_12_41
Type: TC
Location: 43922 - 45598 (+)
Gene ID: HRGMv2_2314_12_42
Type: TC
Location: 45600 - 46712 (+)
Gene ID: HRGMv2_2314_12_43
Type: TC
Location: 46712 - 47665 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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