Cluster: HRGMv2_2314_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2314
- CGC Family ID: CGCFAM_01851
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2314_12 | HRGMv2_2314_12_13 | 11910 | 14234 | + | 3.A.1.135.6 |
| TC | HRGMv2_2314_12 | HRGMv2_2314_12_14 | 14224 | 16074 | + | 3.A.1.135.6 |
| pfam | HRGMv2_2314_12 | HRGMv2_2314_12_15 | 16156 | 17427 | - | IMS | IMS_HHH | IMS_C |
| CAZyme | HRGMv2_2314_12 | HRGMv2_2314_12_16 | 17644 | 18771 | + | GT111 |
Gene ID: HRGMv2_2314_12_13
Type: TC
Location: 11910 - 14234 (+)
Type: TC
Location: 11910 - 14234 (+)
Gene ID: HRGMv2_2314_12_14
Type: TC
Location: 14224 - 16074 (+)
Type: TC
Location: 14224 - 16074 (+)
Gene ID: HRGMv2_2314_12_15
Type: pfam
Location: 16156 - 17427 (-)
Type: pfam
Location: 16156 - 17427 (-)
Gene ID: HRGMv2_2314_12_16
Type: CAZyme
Location: 17644 - 18771 (+)
Type: CAZyme
Location: 17644 - 18771 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp905206195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.