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Cluster: HRGMv2_2314_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2314_11 HRGMv2_2314_11_42 40369 42531 - GH112
pfam HRGMv2_2314_11 HRGMv2_2314_11_43 42547 42711 - DUF6903
TC HRGMv2_2314_11 HRGMv2_2314_11_44 42721 43605 - 3.A.1.1.18
TC HRGMv2_2314_11 HRGMv2_2314_11_45 43621 44535 - 3.A.1.1.18
NULL(UNKNOWN) HRGMv2_2314_11 HRGMv2_2314_11_46 44583 44702 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2314_11 HRGMv2_2314_11_47 44749 46140 - SBP_bac_1
CAZyme HRGMv2_2314_11 HRGMv2_2314_11_48 46433 48121 - GH13_31
CAZyme HRGMv2_2314_11 HRGMv2_2314_11_49 48143 50494 - GH65
TC HRGMv2_2314_11 HRGMv2_2314_11_50 50519 51358 - 3.A.1.1.47
TC HRGMv2_2314_11 HRGMv2_2314_11_51 51374 52267 - 3.A.1.1.47
Gene ID: HRGMv2_2314_11_42
Type: CAZyme
Location: 40369 - 42531 (-)
Gene ID: HRGMv2_2314_11_43
Type: pfam
Location: 42547 - 42711 (-)
Gene ID: HRGMv2_2314_11_44
Type: TC
Location: 42721 - 43605 (-)
Gene ID: HRGMv2_2314_11_45
Type: TC
Location: 43621 - 44535 (-)
Gene ID: HRGMv2_2314_11_46
Type:
Location: 44583 - 44702 (-)
Gene ID: HRGMv2_2314_11_47
Type: STP
Location: 44749 - 46140 (-)
Gene ID: HRGMv2_2314_11_48
Type: CAZyme
Location: 46433 - 48121 (-)
Gene ID: HRGMv2_2314_11_49
Type: CAZyme
Location: 48143 - 50494 (-)
Gene ID: HRGMv2_2314_11_50
Type: TC
Location: 50519 - 51358 (-)
Gene ID: HRGMv2_2314_11_51
Type: TC
Location: 51374 - 52267 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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