dbCAN Logo

Cluster: HRGMv2_2314_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2314_9 HRGMv2_2314_9_74 76756 78102 + 9.B.18.1.3
CAZyme HRGMv2_2314_9 HRGMv2_2314_9_75 78118 78876 + GT2
CAZyme HRGMv2_2314_9 HRGMv2_2314_9_76 78889 79992 + GT4
CAZyme HRGMv2_2314_9 HRGMv2_2314_9_77 79989 81260 + GT4
TC HRGMv2_2314_9 HRGMv2_2314_9_78 81323 82111 + 3.A.1.103.4
NULL(UNKNOWN) HRGMv2_2314_9 HRGMv2_2314_9_79 82129 82590 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2314_9 HRGMv2_2314_9_80 82594 83676 + GT4
CAZyme HRGMv2_2314_9 HRGMv2_2314_9_81 83681 84880 + GT4
TC HRGMv2_2314_9 HRGMv2_2314_9_82 84882 86291 + 3.A.1.103.4
CAZyme HRGMv2_2314_9 HRGMv2_2314_9_83 86319 87764 + GT4
Gene ID: HRGMv2_2314_9_74
Type: TC
Location: 76756 - 78102 (+)
Gene ID: HRGMv2_2314_9_75
Type: CAZyme
Location: 78118 - 78876 (+)
Gene ID: HRGMv2_2314_9_76
Type: CAZyme
Location: 78889 - 79992 (+)
Gene ID: HRGMv2_2314_9_77
Type: CAZyme
Location: 79989 - 81260 (+)
Gene ID: HRGMv2_2314_9_78
Type: TC
Location: 81323 - 82111 (+)
Gene ID: HRGMv2_2314_9_79
Type:
Location: 82129 - 82590 (+)
Gene ID: HRGMv2_2314_9_80
Type: CAZyme
Location: 82594 - 83676 (+)
Gene ID: HRGMv2_2314_9_81
Type: CAZyme
Location: 83681 - 84880 (+)
Gene ID: HRGMv2_2314_9_82
Type: TC
Location: 84882 - 86291 (+)
Gene ID: HRGMv2_2314_9_83
Type: CAZyme
Location: 86319 - 87764 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List