Cluster: HRGMv2_2312_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2312
- CGC Family ID: CGCFAM_00285
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_2 | HRGMv2_2312_2_76 | 100000 | 101319 | - | GH140 |
| TC | HRGMv2_2312_2 | HRGMv2_2312_2_77 | 101346 | 102233 | - | 3.A.1.1.29 |
| TC | HRGMv2_2312_2 | HRGMv2_2312_2_78 | 102246 | 103190 | - | 3.A.1.1.10 |
| TC | HRGMv2_2312_2 | HRGMv2_2312_2_79 | 103283 | 105031 | - | 3.A.1.1.10 |
| TF | HRGMv2_2312_2 | HRGMv2_2312_2_80 | 105212 | 107473 | - | HTH_AraC |
| CAZyme | HRGMv2_2312_2 | HRGMv2_2312_2_81 | 107445 | 108716 | - | GH175 |
Gene ID: HRGMv2_2312_2_76
Type: CAZyme
Location: 100000 - 101319 (-)
Type: CAZyme
Location: 100000 - 101319 (-)
Gene ID: HRGMv2_2312_2_77
Type: TC
Location: 101346 - 102233 (-)
Type: TC
Location: 101346 - 102233 (-)
Gene ID: HRGMv2_2312_2_78
Type: TC
Location: 102246 - 103190 (-)
Type: TC
Location: 102246 - 103190 (-)
Gene ID: HRGMv2_2312_2_79
Type: TC
Location: 103283 - 105031 (-)
Type: TC
Location: 103283 - 105031 (-)
Gene ID: HRGMv2_2312_2_80
Type: TF
Location: 105212 - 107473 (-)
Type: TF
Location: 105212 - 107473 (-)
Gene ID: HRGMv2_2312_2_81
Type: CAZyme
Location: 107445 - 108716 (-)
Type: CAZyme
Location: 107445 - 108716 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.