Cluster: HRGMv2_2312_CGC51
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_54 | HRGMv2_2312_54_5 | 2668 | 3621 | + | GH159 |
| TC | HRGMv2_2312_54 | HRGMv2_2312_54_6 | 3598 | 4971 | - | 2.A.22.5.3 |
| TC | HRGMv2_2312_54 | HRGMv2_2312_54_7 | 5460 | 7001 | + | 2.A.21.2.3 |
| NULL(UNKNOWN) | HRGMv2_2312_54 | HRGMv2_2312_54_8 | 7026 | 7127 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2312_54 | HRGMv2_2312_54_9 | 7389 | 9350 | + | Radical_SAM | Radical_SAM_N | DUF3362 |
| TC | HRGMv2_2312_54 | HRGMv2_2312_54_10 | 9408 | 10763 | + | 2.A.22.5.3 |
Gene ID: HRGMv2_2312_54_5
Type: CAZyme
Location: 2668 - 3621 (+)
Type: CAZyme
Location: 2668 - 3621 (+)
Gene ID: HRGMv2_2312_54_6
Type: TC
Location: 3598 - 4971 (-)
Type: TC
Location: 3598 - 4971 (-)
Gene ID: HRGMv2_2312_54_7
Type: TC
Location: 5460 - 7001 (+)
Type: TC
Location: 5460 - 7001 (+)
Gene ID: HRGMv2_2312_54_8
Type:
Location: 7026 - 7127 (-)
Type:
Location: 7026 - 7127 (-)
Gene ID: HRGMv2_2312_54_9
Type: pfam
Location: 7389 - 9350 (+)
Type: pfam
Location: 7389 - 9350 (+)
Gene ID: HRGMv2_2312_54_10
Type: TC
Location: 9408 - 10763 (+)
Type: TC
Location: 9408 - 10763 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.