Cluster: HRGMv2_2312_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_2 | HRGMv2_2312_2_61 | 80012 | 81388 | - | GH28 |
| CAZyme | HRGMv2_2312_2 | HRGMv2_2312_2_62 | 81458 | 83515 | - | GH65 |
| pfam | HRGMv2_2312_2 | HRGMv2_2312_2_63 | 83825 | 84772 | + | Abi_2 |
| CAZyme | HRGMv2_2312_2 | HRGMv2_2312_2_64 | 84861 | 86888 | - | PL11 |
| TC | HRGMv2_2312_2 | HRGMv2_2312_2_65 | 87060 | 87980 | - | 3.A.1.1.10 |
| TC | HRGMv2_2312_2 | HRGMv2_2312_2_66 | 87993 | 88946 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2312_2_61
Type: CAZyme
Location: 80012 - 81388 (-)
Type: CAZyme
Location: 80012 - 81388 (-)
Gene ID: HRGMv2_2312_2_62
Type: CAZyme
Location: 81458 - 83515 (-)
Type: CAZyme
Location: 81458 - 83515 (-)
Gene ID: HRGMv2_2312_2_63
Type: pfam
Location: 83825 - 84772 (+)
Type: pfam
Location: 83825 - 84772 (+)
Gene ID: HRGMv2_2312_2_64
Type: CAZyme
Location: 84861 - 86888 (-)
Type: CAZyme
Location: 84861 - 86888 (-)
Gene ID: HRGMv2_2312_2_65
Type: TC
Location: 87060 - 87980 (-)
Type: TC
Location: 87060 - 87980 (-)
Gene ID: HRGMv2_2312_2_66
Type: TC
Location: 87993 - 88946 (-)
Type: TC
Location: 87993 - 88946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.