Cluster: HRGMv2_2312_CGC48
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2312
- CGC Family ID: CGCFAM_02893
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_45 | HRGMv2_2312_45_15 | 15012 | 16655 | - | GT5 |
| STP | HRGMv2_2312_45 | HRGMv2_2312_45_16 | 17057 | 17578 | - | Spo0A_C |
| TC | HRGMv2_2312_45 | HRGMv2_2312_45_17 | 17768 | 19387 | - | 8.A.7.1.1 |
Gene ID: HRGMv2_2312_45_15
Type: CAZyme
Location: 15012 - 16655 (-)
Type: CAZyme
Location: 15012 - 16655 (-)
Gene ID: HRGMv2_2312_45_16
Type: STP
Location: 17057 - 17578 (-)
Type: STP
Location: 17057 - 17578 (-)
Gene ID: HRGMv2_2312_45_17
Type: TC
Location: 17768 - 19387 (-)
Type: TC
Location: 17768 - 19387 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2312_45_16 | vegetarian > vegan | 1.29900 | 0.01276 |