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Cluster: HRGMv2_2312_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_36 HRGMv2_2312_36_20 20101 21492 - 3.A.2.1.5
TC HRGMv2_2312_36 HRGMv2_2312_36_21 21493 22401 - 3.A.2.1.5
TC HRGMv2_2312_36 HRGMv2_2312_36_22 22417 24441 - 3.A.2.1.5
pfam HRGMv2_2312_36 HRGMv2_2312_36_23 24441 24923 - ATP-synt_B
TC HRGMv2_2312_36 HRGMv2_2312_36_24 24963 25181 - 3.A.2.1.5
TC HRGMv2_2312_36 HRGMv2_2312_36_25 25228 25917 - 3.A.2.1.5
CAZyme HRGMv2_2312_36 HRGMv2_2312_36_26 26166 28889 + GH28
STP HRGMv2_2312_36 HRGMv2_2312_36_27 28896 29345 + GAF
CAZyme HRGMv2_2312_36 HRGMv2_2312_36_28 29457 31526 - GH154
Gene ID: HRGMv2_2312_36_20
Type: TC
Location: 20101 - 21492 (-)
Gene ID: HRGMv2_2312_36_21
Type: TC
Location: 21493 - 22401 (-)
Gene ID: HRGMv2_2312_36_22
Type: TC
Location: 22417 - 24441 (-)
Gene ID: HRGMv2_2312_36_23
Type: pfam
Location: 24441 - 24923 (-)
Gene ID: HRGMv2_2312_36_24
Type: TC
Location: 24963 - 25181 (-)
Gene ID: HRGMv2_2312_36_25
Type: TC
Location: 25228 - 25917 (-)
Gene ID: HRGMv2_2312_36_26
Type: CAZyme
Location: 26166 - 28889 (+)
Gene ID: HRGMv2_2312_36_27
Type: STP
Location: 28896 - 29345 (+)
Gene ID: HRGMv2_2312_36_28
Type: CAZyme
Location: 29457 - 31526 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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