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Cluster: HRGMv2_2312_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_28 HRGMv2_2312_28_26 26782 28098 + 3.D.6.1.2
TC HRGMv2_2312_28 HRGMv2_2312_28_27 28109 29038 + 3.D.6.1.2
TC HRGMv2_2312_28 HRGMv2_2312_28_28 29041 29676 + 3.D.6.1.4
TC HRGMv2_2312_28 HRGMv2_2312_28_29 29669 30415 + 3.D.6.1.2
TC HRGMv2_2312_28 HRGMv2_2312_28_30 30510 31094 + 3.D.6.1.2
TC HRGMv2_2312_28 HRGMv2_2312_28_31 31110 31910 + 3.D.6.1.2
CAZyme HRGMv2_2312_28 HRGMv2_2312_28_32 32050 33156 + GH25
Gene ID: HRGMv2_2312_28_26
Type: TC
Location: 26782 - 28098 (+)
Gene ID: HRGMv2_2312_28_27
Type: TC
Location: 28109 - 29038 (+)
Gene ID: HRGMv2_2312_28_28
Type: TC
Location: 29041 - 29676 (+)
Gene ID: HRGMv2_2312_28_29
Type: TC
Location: 29669 - 30415 (+)
Gene ID: HRGMv2_2312_28_30
Type: TC
Location: 30510 - 31094 (+)
Gene ID: HRGMv2_2312_28_31
Type: TC
Location: 31110 - 31910 (+)
Gene ID: HRGMv2_2312_28_32
Type: CAZyme
Location: 32050 - 33156 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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