Cluster: HRGMv2_2312_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2312
- CGC Family ID: CGCFAM_00327
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_23 | HRGMv2_2312_23_25 | 24747 | 27440 | - | GT51 |
| pfam | HRGMv2_2312_23 | HRGMv2_2312_23_26 | 27682 | 28338 | + | UPF0029 | DUF1949 |
| TC | HRGMv2_2312_23 | HRGMv2_2312_23_27 | 28484 | 29833 | + | 1.A.26.1.2 |
| TC | HRGMv2_2312_23 | HRGMv2_2312_23_28 | 29923 | 31302 | + | 2.A.66.1.32 |
| TC | HRGMv2_2312_23 | HRGMv2_2312_23_29 | 31351 | 33144 | - | 3.A.1.106.3 |
| TC | HRGMv2_2312_23 | HRGMv2_2312_23_30 | 33147 | 34928 | - | 3.A.1.106.3 |
Gene ID: HRGMv2_2312_23_25
Type: CAZyme
Location: 24747 - 27440 (-)
Type: CAZyme
Location: 24747 - 27440 (-)
Gene ID: HRGMv2_2312_23_26
Type: pfam
Location: 27682 - 28338 (+)
Type: pfam
Location: 27682 - 28338 (+)
Gene ID: HRGMv2_2312_23_27
Type: TC
Location: 28484 - 29833 (+)
Type: TC
Location: 28484 - 29833 (+)
Gene ID: HRGMv2_2312_23_28
Type: TC
Location: 29923 - 31302 (+)
Type: TC
Location: 29923 - 31302 (+)
Gene ID: HRGMv2_2312_23_29
Type: TC
Location: 31351 - 33144 (-)
Type: TC
Location: 31351 - 33144 (-)
Gene ID: HRGMv2_2312_23_30
Type: TC
Location: 33147 - 34928 (-)
Type: TC
Location: 33147 - 34928 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.