Cluster: HRGMv2_2312_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2312_18 | HRGMv2_2312_18_46 | 53039 | 53989 | - | 3.A.1.1.20 |
| TC | HRGMv2_2312_18 | HRGMv2_2312_18_47 | 53986 | 54894 | - | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_2312_18 | HRGMv2_2312_18_48 | 54926 | 57241 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2312_18 | HRGMv2_2312_18_49 | 57357 | 58160 | - | PHP | PHP_C |
| CAZyme | HRGMv2_2312_18 | HRGMv2_2312_18_50 | 58298 | 61306 | + | GT39 |
Gene ID: HRGMv2_2312_18_46
Type: TC
Location: 53039 - 53989 (-)
Type: TC
Location: 53039 - 53989 (-)
Gene ID: HRGMv2_2312_18_47
Type: TC
Location: 53986 - 54894 (-)
Type: TC
Location: 53986 - 54894 (-)
Gene ID: HRGMv2_2312_18_48
Type:
Location: 54926 - 57241 (-)
Type:
Location: 54926 - 57241 (-)
Gene ID: HRGMv2_2312_18_49
Type: pfam
Location: 57357 - 58160 (-)
Type: pfam
Location: 57357 - 58160 (-)
Gene ID: HRGMv2_2312_18_50
Type: CAZyme
Location: 58298 - 61306 (+)
Type: CAZyme
Location: 58298 - 61306 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.