Cluster: HRGMv2_2312_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2312
- CGC Family ID: CGCFAM_00021
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_18 | HRGMv2_2312_18_7 | 5163 | 8315 | - | GH106 |
| CAZyme | HRGMv2_2312_18 | HRGMv2_2312_18_8 | 8340 | 10457 | - | GH142 |
| NULL(UNKNOWN) | HRGMv2_2312_18 | HRGMv2_2312_18_9 | 10461 | 12185 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2312_18 | HRGMv2_2312_18_10 | 12228 | 13130 | - | 3.A.1.1.29 |
| TC | HRGMv2_2312_18 | HRGMv2_2312_18_11 | 13127 | 14071 | - | 3.A.1.1.10 |
| CAZyme | HRGMv2_2312_18 | HRGMv2_2312_18_12 | 14097 | 15230 | - | GH33 |
Gene ID: HRGMv2_2312_18_7
Type: CAZyme
Location: 5163 - 8315 (-)
Type: CAZyme
Location: 5163 - 8315 (-)
Gene ID: HRGMv2_2312_18_8
Type: CAZyme
Location: 8340 - 10457 (-)
Type: CAZyme
Location: 8340 - 10457 (-)
Gene ID: HRGMv2_2312_18_9
Type:
Location: 10461 - 12185 (-)
Type:
Location: 10461 - 12185 (-)
Gene ID: HRGMv2_2312_18_10
Type: TC
Location: 12228 - 13130 (-)
Type: TC
Location: 12228 - 13130 (-)
Gene ID: HRGMv2_2312_18_11
Type: TC
Location: 13127 - 14071 (-)
Type: TC
Location: 13127 - 14071 (-)
Gene ID: HRGMv2_2312_18_12
Type: CAZyme
Location: 14097 - 15230 (-)
Type: CAZyme
Location: 14097 - 15230 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.