Cluster: HRGMv2_2312_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_16 | HRGMv2_2312_16_8 | 8464 | 10398 | + | PL27 | PL27 |
| CAZyme | HRGMv2_2312_16 | HRGMv2_2312_16_9 | 10414 | 12465 | + | GH42 |
| TC | HRGMv2_2312_16 | HRGMv2_2312_16_10 | 12552 | 13466 | + | 2.A.69.4.2 |
| CAZyme | HRGMv2_2312_16 | HRGMv2_2312_16_11 | 13456 | 16176 | - | CBM67 | GH78 |
| TC | HRGMv2_2312_16 | HRGMv2_2312_16_12 | 16261 | 17634 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2312_16_8
Type: CAZyme
Location: 8464 - 10398 (+)
Type: CAZyme
Location: 8464 - 10398 (+)
Gene ID: HRGMv2_2312_16_9
Type: CAZyme
Location: 10414 - 12465 (+)
Type: CAZyme
Location: 10414 - 12465 (+)
Gene ID: HRGMv2_2312_16_10
Type: TC
Location: 12552 - 13466 (+)
Type: TC
Location: 12552 - 13466 (+)
Gene ID: HRGMv2_2312_16_11
Type: CAZyme
Location: 13456 - 16176 (-)
Type: CAZyme
Location: 13456 - 16176 (-)
Gene ID: HRGMv2_2312_16_12
Type: TC
Location: 16261 - 17634 (-)
Type: TC
Location: 16261 - 17634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.