Cluster: HRGMv2_2312_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2312_15 | HRGMv2_2312_15_30 | 32987 | 34543 | + | 3.A.1.5.11 |
| TC | HRGMv2_2312_15 | HRGMv2_2312_15_31 | 34581 | 35540 | + | 3.A.1.5.20 |
| TC | HRGMv2_2312_15 | HRGMv2_2312_15_32 | 35568 | 36392 | + | 3.A.1.5.27 |
| TC | HRGMv2_2312_15 | HRGMv2_2312_15_33 | 36395 | 37954 | + | 3.A.1.5.23 |
| TC | HRGMv2_2312_15 | HRGMv2_2312_15_34 | 38028 | 40691 | + | 3.A.3.2.21 |
| CAZyme | HRGMv2_2312_15 | HRGMv2_2312_15_35 | 40609 | 42939 | - | GH2 |
Gene ID: HRGMv2_2312_15_30
Type: TC
Location: 32987 - 34543 (+)
Type: TC
Location: 32987 - 34543 (+)
Gene ID: HRGMv2_2312_15_31
Type: TC
Location: 34581 - 35540 (+)
Type: TC
Location: 34581 - 35540 (+)
Gene ID: HRGMv2_2312_15_32
Type: TC
Location: 35568 - 36392 (+)
Type: TC
Location: 35568 - 36392 (+)
Gene ID: HRGMv2_2312_15_33
Type: TC
Location: 36395 - 37954 (+)
Type: TC
Location: 36395 - 37954 (+)
Gene ID: HRGMv2_2312_15_34
Type: TC
Location: 38028 - 40691 (+)
Type: TC
Location: 38028 - 40691 (+)
Gene ID: HRGMv2_2312_15_35
Type: CAZyme
Location: 40609 - 42939 (-)
Type: CAZyme
Location: 40609 - 42939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.