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Cluster: HRGMv2_2312_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2312_15 HRGMv2_2312_15_4 1744 2913 + GH25
pfam HRGMv2_2312_15 HRGMv2_2312_15_5 2973 3434 - TspO_MBR
CAZyme HRGMv2_2312_15 HRGMv2_2312_15_6 3678 4967 + GH28
CAZyme HRGMv2_2312_15 HRGMv2_2312_15_7 5282 6364 + GH105
CAZyme HRGMv2_2312_15 HRGMv2_2312_15_8 6435 8639 + GH106
TF HRGMv2_2312_15 HRGMv2_2312_15_9 8705 9604 + HTH_1
pfam HRGMv2_2312_15 HRGMv2_2312_15_10 9773 10897 + Meth_synt_2
CAZyme HRGMv2_2312_15 HRGMv2_2312_15_11 10971 12638 + GH2
TC HRGMv2_2312_15 HRGMv2_2312_15_12 12758 14086 - 1.B.52.2.2
Gene ID: HRGMv2_2312_15_4
Type: CAZyme
Location: 1744 - 2913 (+)
Gene ID: HRGMv2_2312_15_5
Type: pfam
Location: 2973 - 3434 (-)
Gene ID: HRGMv2_2312_15_6
Type: CAZyme
Location: 3678 - 4967 (+)
Gene ID: HRGMv2_2312_15_7
Type: CAZyme
Location: 5282 - 6364 (+)
Gene ID: HRGMv2_2312_15_8
Type: CAZyme
Location: 6435 - 8639 (+)
Gene ID: HRGMv2_2312_15_9
Type: TF
Location: 8705 - 9604 (+)
Gene ID: HRGMv2_2312_15_10
Type: pfam
Location: 9773 - 10897 (+)
Gene ID: HRGMv2_2312_15_11
Type: CAZyme
Location: 10971 - 12638 (+)
Gene ID: HRGMv2_2312_15_12
Type: TC
Location: 12758 - 14086 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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