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Cluster: HRGMv2_2312_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_13 HRGMv2_2312_13_55 69530 70918 + 3.A.1.1.28
TC HRGMv2_2312_13 HRGMv2_2312_13_56 71015 71914 + 3.A.1.1.20
TC HRGMv2_2312_13 HRGMv2_2312_13_57 71911 72741 + 3.A.1.1.34
CAZyme HRGMv2_2312_13 HRGMv2_2312_13_58 72772 76113 + GH106
pfam HRGMv2_2312_13 HRGMv2_2312_13_59 76493 77578 + Fic | Fic_N
peptidase HRGMv2_2312_13 HRGMv2_2312_13_60 77671 78591 + S09.UPW
TC HRGMv2_2312_13 HRGMv2_2312_13_61 78588 80684 + 1.B.52.2.1
Gene ID: HRGMv2_2312_13_55
Type: TC
Location: 69530 - 70918 (+)
Gene ID: HRGMv2_2312_13_56
Type: TC
Location: 71015 - 71914 (+)
Gene ID: HRGMv2_2312_13_57
Type: TC
Location: 71911 - 72741 (+)
Gene ID: HRGMv2_2312_13_58
Type: CAZyme
Location: 72772 - 76113 (+)
Gene ID: HRGMv2_2312_13_59
Type: pfam
Location: 76493 - 77578 (+)
Gene ID: HRGMv2_2312_13_60
Type: peptidase
Location: 77671 - 78591 (+)
Gene ID: HRGMv2_2312_13_61
Type: TC
Location: 78588 - 80684 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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