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Cluster: HRGMv2_2312_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_13 HRGMv2_2312_13_4 3951 5747 + 8.A.59.2.1
pfam HRGMv2_2312_13 HRGMv2_2312_13_5 5892 6575 + DUF624
CAZyme HRGMv2_2312_13 HRGMv2_2312_13_6 6607 7614 + CE7
CAZyme HRGMv2_2312_13 HRGMv2_2312_13_7 7683 10046 - GH94
CAZyme HRGMv2_2312_13 HRGMv2_2312_13_8 10030 14121 - GH105 | GH28
pfam HRGMv2_2312_13 HRGMv2_2312_13_9 14226 15845 - DUF3502
TC HRGMv2_2312_13 HRGMv2_2312_13_10 15901 16785 - 3.A.1.1.29
TC HRGMv2_2312_13 HRGMv2_2312_13_11 16820 17767 - 3.A.1.1.45
Gene ID: HRGMv2_2312_13_4
Type: TC
Location: 3951 - 5747 (+)
Gene ID: HRGMv2_2312_13_5
Type: pfam
Location: 5892 - 6575 (+)
Gene ID: HRGMv2_2312_13_6
Type: CAZyme
Location: 6607 - 7614 (+)
Gene ID: HRGMv2_2312_13_7
Type: CAZyme
Location: 7683 - 10046 (-)
Gene ID: HRGMv2_2312_13_8
Type: CAZyme
Location: 10030 - 14121 (-)
Gene ID: HRGMv2_2312_13_9
Type: pfam
Location: 14226 - 15845 (-)
Gene ID: HRGMv2_2312_13_10
Type: TC
Location: 15901 - 16785 (-)
Gene ID: HRGMv2_2312_13_11
Type: TC
Location: 16820 - 17767 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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