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Cluster: HRGMv2_2312_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_12 HRGMv2_2312_12_59 69525 70472 + 3.A.1.1.10
TC HRGMv2_2312_12 HRGMv2_2312_12_60 70469 71332 + 3.A.1.1.29
STP HRGMv2_2312_12 HRGMv2_2312_12_61 71355 72884 + SBP_bac_1
CAZyme HRGMv2_2312_12 HRGMv2_2312_12_62 73002 75491 + GH95
TF HRGMv2_2312_12 HRGMv2_2312_12_63 75488 77716 + HTH_AraC
CAZyme HRGMv2_2312_12 HRGMv2_2312_12_64 77861 79819 + CBM91 | GH43_12
pfam HRGMv2_2312_12 HRGMv2_2312_12_65 79999 80529 - Pro_isomerase
pfam HRGMv2_2312_12 HRGMv2_2312_12_66 80612 81355 + Acetyltransf_1 | Acetyltransf_3
TC HRGMv2_2312_12 HRGMv2_2312_12_67 81619 83385 + 1.A.11.2.7
Gene ID: HRGMv2_2312_12_59
Type: TC
Location: 69525 - 70472 (+)
Gene ID: HRGMv2_2312_12_60
Type: TC
Location: 70469 - 71332 (+)
Gene ID: HRGMv2_2312_12_61
Type: STP
Location: 71355 - 72884 (+)
Gene ID: HRGMv2_2312_12_62
Type: CAZyme
Location: 73002 - 75491 (+)
Gene ID: HRGMv2_2312_12_63
Type: TF
Location: 75488 - 77716 (+)
Gene ID: HRGMv2_2312_12_64
Type: CAZyme
Location: 77861 - 79819 (+)
Gene ID: HRGMv2_2312_12_65
Type: pfam
Location: 79999 - 80529 (-)
Gene ID: HRGMv2_2312_12_66
Type: pfam
Location: 80612 - 81355 (+)
Gene ID: HRGMv2_2312_12_67
Type: TC
Location: 81619 - 83385 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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