Cluster: HRGMv2_2312_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_11 | HRGMv2_2312_11_85 | 79713 | 80612 | + | GH43_22 |
| pfam | HRGMv2_2312_11 | HRGMv2_2312_11_86 | 80882 | 81532 | + | CxxCxxCC |
| CAZyme | HRGMv2_2312_11 | HRGMv2_2312_11_87 | 81529 | 82884 | + | GT2 |
| peptidase | HRGMv2_2312_11 | HRGMv2_2312_11_88 | 82931 | 84223 | + | S11.UPW |
| TC | HRGMv2_2312_11 | HRGMv2_2312_11_89 | 84297 | 85148 | + | 3.A.1.3.15 |
| TC | HRGMv2_2312_11 | HRGMv2_2312_11_90 | 85242 | 85952 | + | 3.A.1.3.20 |
| TC | HRGMv2_2312_11 | HRGMv2_2312_11_91 | 85936 | 86769 | + | 3.A.1.3.25 |
Gene ID: HRGMv2_2312_11_85
Type: CAZyme
Location: 79713 - 80612 (+)
Type: CAZyme
Location: 79713 - 80612 (+)
Gene ID: HRGMv2_2312_11_86
Type: pfam
Location: 80882 - 81532 (+)
Type: pfam
Location: 80882 - 81532 (+)
Gene ID: HRGMv2_2312_11_87
Type: CAZyme
Location: 81529 - 82884 (+)
Type: CAZyme
Location: 81529 - 82884 (+)
Gene ID: HRGMv2_2312_11_88
Type: peptidase
Location: 82931 - 84223 (+)
Type: peptidase
Location: 82931 - 84223 (+)
Gene ID: HRGMv2_2312_11_89
Type: TC
Location: 84297 - 85148 (+)
Type: TC
Location: 84297 - 85148 (+)
Gene ID: HRGMv2_2312_11_90
Type: TC
Location: 85242 - 85952 (+)
Type: TC
Location: 85242 - 85952 (+)
Gene ID: HRGMv2_2312_11_91
Type: TC
Location: 85936 - 86769 (+)
Type: TC
Location: 85936 - 86769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.