Cluster: HRGMv2_2312_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2312
- CGC Family ID: CGCFAM_00939
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2312_11 | HRGMv2_2312_11_65 | 52236 | 54668 | + | GH2 |
| TF | HRGMv2_2312_11 | HRGMv2_2312_11_66 | 54745 | 55824 | + | LacI |
| TC | HRGMv2_2312_11 | HRGMv2_2312_11_67 | 56287 | 57246 | + | 3.A.1.1.10 |
| TC | HRGMv2_2312_11 | HRGMv2_2312_11_68 | 57295 | 58227 | + | 3.A.1.1.29 |
| pfam | HRGMv2_2312_11 | HRGMv2_2312_11_69 | 58285 | 59868 | + | DUF3502 |
| CAZyme | HRGMv2_2312_11 | HRGMv2_2312_11_70 | 60043 | 61788 | + | GH35 |
Gene ID: HRGMv2_2312_11_65
Type: CAZyme
Location: 52236 - 54668 (+)
Type: CAZyme
Location: 52236 - 54668 (+)
Gene ID: HRGMv2_2312_11_66
Type: TF
Location: 54745 - 55824 (+)
Type: TF
Location: 54745 - 55824 (+)
Gene ID: HRGMv2_2312_11_67
Type: TC
Location: 56287 - 57246 (+)
Type: TC
Location: 56287 - 57246 (+)
Gene ID: HRGMv2_2312_11_68
Type: TC
Location: 57295 - 58227 (+)
Type: TC
Location: 57295 - 58227 (+)
Gene ID: HRGMv2_2312_11_69
Type: pfam
Location: 58285 - 59868 (+)
Type: pfam
Location: 58285 - 59868 (+)
Gene ID: HRGMv2_2312_11_70
Type: CAZyme
Location: 60043 - 61788 (+)
Type: CAZyme
Location: 60043 - 61788 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900755865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.