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Cluster: HRGMv2_2312_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_10 HRGMv2_2312_10_58 54906 56234 + 2.A.66.1.37
pfam HRGMv2_2312_10 HRGMv2_2312_10_59 56243 57268 - Asparaginase | Asparaginase_C
pfam HRGMv2_2312_10 HRGMv2_2312_10_60 57250 57717 - ThrE | ThrE_2
TC HRGMv2_2312_10 HRGMv2_2312_10_61 57788 58582 - 2.A.79.1.4
CAZyme HRGMv2_2312_10 HRGMv2_2312_10_62 58627 61449 - GH2
TC HRGMv2_2312_10 HRGMv2_2312_10_63 61547 63019 - 1.B.52.2.1
CAZyme HRGMv2_2312_10 HRGMv2_2312_10_64 63234 64835 + GH28
TC HRGMv2_2312_10 HRGMv2_2312_10_65 64865 65560 - 2.A.122.1.4
NULL(UNKNOWN) HRGMv2_2312_10 HRGMv2_2312_10_66 65562 65669 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2312_10 HRGMv2_2312_10_67 65696 66070 - 1.E.14.1.17
CAZyme HRGMv2_2312_10 HRGMv2_2312_10_68 66240 67538 - GH28
TC HRGMv2_2312_10 HRGMv2_2312_10_69 67563 68927 - 2.A.66.1.33
Gene ID: HRGMv2_2312_10_58
Type: TC
Location: 54906 - 56234 (+)
Gene ID: HRGMv2_2312_10_59
Type: pfam
Location: 56243 - 57268 (-)
Gene ID: HRGMv2_2312_10_60
Type: pfam
Location: 57250 - 57717 (-)
Gene ID: HRGMv2_2312_10_61
Type: TC
Location: 57788 - 58582 (-)
Gene ID: HRGMv2_2312_10_62
Type: CAZyme
Location: 58627 - 61449 (-)
Gene ID: HRGMv2_2312_10_63
Type: TC
Location: 61547 - 63019 (-)
Gene ID: HRGMv2_2312_10_64
Type: CAZyme
Location: 63234 - 64835 (+)
Gene ID: HRGMv2_2312_10_65
Type: TC
Location: 64865 - 65560 (-)
Gene ID: HRGMv2_2312_10_66
Type:
Location: 65562 - 65669 (-)
Gene ID: HRGMv2_2312_10_67
Type: TC
Location: 65696 - 66070 (-)
Gene ID: HRGMv2_2312_10_68
Type: CAZyme
Location: 66240 - 67538 (-)
Gene ID: HRGMv2_2312_10_69
Type: TC
Location: 67563 - 68927 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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